{"id":1862,"date":"2022-03-23T17:41:34","date_gmt":"2022-03-23T17:41:34","guid":{"rendered":"https:\/\/www.marine.usf.edu\/comit\/?p=1862"},"modified":"2023-10-19T19:10:03","modified_gmt":"2023-10-19T19:10:03","slug":"tbns-3","status":"publish","type":"post","link":"https:\/\/www.marine.usf.edu\/comit\/2022\/03\/23\/tbns-3\/","title":{"rendered":"Tampa Bay Nested Survey Project &#8211; Student Blog #3"},"content":{"rendered":"<p>[et_pb_section fb_built=&#8221;1&#8243; _builder_version=&#8221;4.16&#8243; _module_preset=&#8221;default&#8221; custom_padding=&#8221;20px|||||&#8221; global_colors_info=&#8221;{}&#8221;][et_pb_row _builder_version=&#8221;4.16&#8243; _module_preset=&#8221;default&#8221; custom_padding=&#8221;2px|||||&#8221; global_colors_info=&#8221;{}&#8221;][et_pb_column type=&#8221;4_4&#8243; _builder_version=&#8221;4.16&#8243; _module_preset=&#8221;default&#8221; global_colors_info=&#8221;{}&#8221;][et_pb_text _builder_version=&#8221;4.16&#8243; _module_preset=&#8221;default&#8221; global_colors_info=&#8221;{}&#8221;]<\/p>\n<p style=\"text-align: center;\"><span style=\"font-size: large;\"><em>Me at my desk at CMS, creating digital ecosystems!<\/em><\/span><\/p>\n<p>[\/et_pb_text][et_pb_text _builder_version=&#8221;4.16&#8243; _module_preset=&#8221;default&#8221; global_colors_info=&#8221;{}&#8221;]<\/p>\n<p style=\"text-align: center;\"><span style=\"font-size: large;\">Written by: Bea Combs-Hintze, PhD student with Drs. David Naar &amp; Steve Murawski.<\/span><span style=\"font-size: large;\"><\/span><\/p>\n<p style=\"text-align: center;\"><em><\/em><\/p>\n<p>[\/et_pb_text][et_pb_text _builder_version=&#8221;4.16&#8243; _module_preset=&#8221;default&#8221; text_font_size=&#8221;16px&#8221; text_line_height=&#8221;1.8em&#8221; global_colors_info=&#8221;{}&#8221;]<\/p>\n<p><span style=\"text-decoration: underline; font-size: large;\"><strong>It\u2019s all about Balance \u2013 in life, and in modeling<\/strong><\/span><\/p>\n<p><span style=\"font-size: large;\">I am expecting my first child at the end of the month. (Deep breaths.)<\/span><\/p>\n<p><span style=\"font-size: large;\">Life these days is about seeking balance: between work, research, self-care, and motherhood preparations. I take comfort in the fact that as an ecological modeler, I am no stranger to seeking balance. Any change to an ecosystem may influence its overall energy or mass balance, and\/or impact other variables within the system. We build and use computer models to replicate and better understand real-world systems that are complex and difficult to observe directly.\u00a0<\/span><\/p>\n<p>[\/et_pb_text][et_pb_text _builder_version=&#8221;4.16&#8243; _module_preset=&#8221;default&#8221; text_font_size=&#8221;16px&#8221; text_line_height=&#8221;1.8em&#8221; global_colors_info=&#8221;{}&#8221;]<\/p>\n<p><span style=\"font-size: large;\">The ecological model I work with is called Atlantis. It is used in marine ecosystem management and takes into account all parts of a marine ecosystem: biophysical, economic, and social. It\u2019s powerful, but not perfect.<\/span><\/p>\n<p><span style=\"font-size: large;\">At the core of Atlantis is an ability to track nutrient flows through the main biological groups in the system. The key ecological processes modelled are consumption, production, waste production, migration, predation, recruitment, mortality, and habitat dependency. So basically, who\u2019s dying, how many organisms are reproducing, what\u2019s the health of the organisms, is there enough food for everyone, and so on. All of these parts need to be based on the balance observed in the true system.\u00a0<\/span><\/p>\n<p>[\/et_pb_text][et_pb_image src=&#8221;https:\/\/www.marine.usf.edu\/comit\/wp-content\/uploads\/2022\/03\/bea2.png&#8221; title_text=&#8221;bea2&#8243; align=&#8221;center&#8221; _builder_version=&#8221;4.16&#8243; _module_preset=&#8221;default&#8221; global_colors_info=&#8221;{}&#8221;][\/et_pb_image][et_pb_text _builder_version=&#8221;4.16&#8243; _module_preset=&#8221;default&#8221; global_colors_info=&#8221;{}&#8221;]<\/p>\n<p style=\"text-align: center;\"><span style=\"font-size: large;\"><em>Graphic representation of the Atlantis Gulf of Mexico Model \u2013 which is computer magic + math, capable of representing the various parts of the marine ecosystem.<\/em><\/span><\/p>\n<p>[\/et_pb_text][et_pb_text _builder_version=&#8221;4.16&#8243; _module_preset=&#8221;default&#8221; text_font_size=&#8221;16px&#8221; text_line_height=&#8221;1.8em&#8221; global_colors_info=&#8221;{}&#8221;]<\/p>\n<p><span style=\"font-size: large;\">Unfortunately, habitat tends to be underrepresented in this model. Habitat surveys are done to fit specific needs and may be conducted across different time and space scales. This becomes a problem when modeling large-scale ecosystem changes.<\/span><\/p>\n<p><span style=\"font-size: large;\">That\u2019s why I\u2019m focused on trying to improve how the model incorporates seagrass meadows. Seagrass provides food and habitat to marine and human communities, protects coastlines from erosion, and is a crucial blue carbon sink. The recent (and inaugural) mapping survey by the COMIT team &#8212; the Tampa Bay Bathymetry Experiment (TBBEx) project &#8212; used a combination of technologies to generate high-resolution maps of shallow coastal areas, which is where seagrass lives.<\/span><\/p>\n<p><span style=\"font-size: large;\"><strong>Go team COMIT!<\/strong><\/span><\/p>\n<p><span style=\"font-size: large;\">These new maps from TBBEx and COMIT&#8217;s future endeavors will give us a closer look at how storms will impact sea level for coastal communities, help with shipping and boating dredging planning, and help further define habitat for macrofauna like the Florida manatee and a variety of marine fish species. They\u2019re also going to help me better characterize seagrass beds and incorporate those in the Atlantis model.<\/span><\/p>\n<p><span style=\"font-size: large;\">The technologies used in the COMIT survey included multibeam sonar (sound wave) sensors on an uncrewed surface vessel (USV), which offered a detailed look at the bathymetry in some of the deeper inshore areas, and new laser detection and ranging (LiDAR) data gathered by sensors on a plane which covered the shallower inshore areas.<\/span><\/p>\n<p>[\/et_pb_text][et_pb_image src=&#8221;https:\/\/www.marine.usf.edu\/comit\/wp-content\/uploads\/2022\/03\/bea3.jpg&#8221; title_text=&#8221;bea3&#8243; align=&#8221;center&#8221; _builder_version=&#8221;4.16&#8243; _module_preset=&#8221;default&#8221; width=&#8221;71%&#8221; global_colors_info=&#8221;{}&#8221;][\/et_pb_image][et_pb_text _builder_version=&#8221;4.16&#8243; _module_preset=&#8221;default&#8221; global_colors_info=&#8221;{}&#8221;]<\/p>\n<p style=\"text-align: center;\"><span style=\"font-size: large;\"><em>Me on the chase boat last Fall, part of the COMIT field testing of the USV&#8217;s ability to map inshore bathymetry.<\/em><\/span><\/p>\n<p>[\/et_pb_text][et_pb_text _builder_version=&#8221;4.16&#8243; _module_preset=&#8221;default&#8221; text_font_size=&#8221;16px&#8221; text_line_height=&#8221;1.8em&#8221; global_colors_info=&#8221;{}&#8221;]<\/p>\n<p><span style=\"font-size: large;\">With this new high-resolution data in our hands, we can begin to get a clearer picture of the bottom of Tampa Bay, and in my case, the habitats that reside there.<\/span><\/p>\n<p><span style=\"font-size: large;\">The magic happens when this information is combined with existing optical surveys (such as from divers, boats, or plane photos) and satellite imagery &#8212; which can distinguish between the chlorophyll from phytoplankton and other types of vegetation like seagrass. This info can \u201cground-truth\u201d or verify our sonic and laser measurements.<\/span><\/p>\n<p><span style=\"font-size: large;\">All of these technologies &#8212; satellites, planes, and USVs \u2013 can often cover larger areas more efficiently than what we can do from traditional research vessels, as well as reach the nooks and crannies that these ships can\u2019t safely navigate. They also complement each other; LiDAR data gives us the details of the bottom \u2013 how rugged it is, what the slope is like, and more. But it only works well in shallower water where the laser can penetrate to the seafloor. Multibeam sonar is really good at getting accurate bathymetry or depth information and can be used in much greater depth ranges, but it\u2019s incredibly inefficient at extremely shallow depths. Combining the backscatter data from both LiDAR and multibeam with satellite images help us discern if what we are seeing on the bottom is seagrass or rock or mud\u2026<\/span><\/p>\n<p><span style=\"font-size: large;\">As I look around at my habitat these days, I see the structure of my ecosystem here at home changing dramatically: a bassinet in front of the bookshelf, a jogging stroller blocking the table. I find myself wishing I could run simulations on my life to see how the future of my research will look with a baby on my hip, but I guess some things are best left to surprise. I trust that I will adapt to my new world relatively quickly.<\/span><\/p>\n<p><span style=\"font-size: large;\">I am much more concerned about how changes to our marine habitat will influence the life of my child. Will seagrass loss cause faster coastal erosion? Will algae blooms shade the seafloor and cause seagrass die-offs that ultimately impact fisheries? How will seagrass migrate with rising sea level? These are the types of questions that ecosystem models are poised to answer, as long as they are balanced and represented well with data. We\u2019ll keep doing our part to ensure our science can help make better policy and management decisions moving forward.<\/span><\/p>\n<p>[\/et_pb_text][et_pb_image src=&#8221;https:\/\/www.marine.usf.edu\/comit\/wp-content\/uploads\/2022\/03\/bea4-240&#215;300.jpg&#8221; title_text=&#8221;bea4&#8243; align=&#8221;center&#8221; _builder_version=&#8221;4.16&#8243; _module_preset=&#8221;default&#8221; transform_scale=&#8221;106%|106%&#8221; width=&#8221;80%&#8221; module_alignment=&#8221;center&#8221; global_colors_info=&#8221;{}&#8221;][\/et_pb_image][et_pb_text _builder_version=&#8221;4.16&#8243; _module_preset=&#8221;default&#8221; global_colors_info=&#8221;{}&#8221;]<\/p>\n<p style=\"text-align: center;\"><span style=\"font-size: large;\"><em>\u00a0P.S. Since this article has been written baby Teigan Leo Hintze has landed on Earth!<\/em><\/span><\/p>\n<p>[\/et_pb_text][\/et_pb_column][\/et_pb_row][\/et_pb_section][et_pb_section fb_built=&#8221;1&#8243; theme_builder_area=&#8221;post_content&#8221; _builder_version=&#8221;4.22.2&#8243; _module_preset=&#8221;default&#8221;][et_pb_row _builder_version=&#8221;4.22.2&#8243; _module_preset=&#8221;default&#8221; theme_builder_area=&#8221;post_content&#8221;][et_pb_column _builder_version=&#8221;4.22.2&#8243; _module_preset=&#8221;default&#8221; type=&#8221;4_4&#8243; theme_builder_area=&#8221;post_content&#8221;][et_pb_text _builder_version=&#8221;4.22.2&#8243; _module_preset=&#8221;default&#8221; theme_builder_area=&#8221;post_content&#8221; _dynamic_attributes=&#8221;content&#8221; hover_enabled=&#8221;0&#8243; sticky_enabled=&#8221;0&#8243;]@ET-DC@eyJkeW5hbWljIjp0cnVlLCJjb250ZW50IjoicG9zdF90YWdzIiwic2V0dGluZ3MiOnsiYmVmb3JlIjoiIiwiYWZ0ZXIiOiIiLCJsaW5rX3RvX3Rlcm1fcGFnZSI6Im9uIiwic2VwYXJhdG9yIjoiIHwgIiwiY2F0ZWdvcnlfdHlwZSI6InBvc3RfdGFnIn19@[\/et_pb_text][\/et_pb_column][\/et_pb_row][\/et_pb_section]<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Me at my desk at CMS, creating digital ecosystems!Written by: Bea Combs-Hintze, PhD student with Drs. David Naar &amp; Steve Murawski. It\u2019s all about Balance \u2013 in life, and in modeling I am expecting my first child at the end of the month. (Deep breaths.) Life these days is about seeking balance: between work, research, [&hellip;]<\/p>\n","protected":false},"author":29,"featured_media":1872,"comment_status":"closed","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_et_pb_use_builder":"on","_et_pb_old_content":"","_et_gb_content_width":"","om_disable_all_campaigns":false,"_exactmetrics_skip_tracking":false,"_exactmetrics_sitenote_active":false,"_exactmetrics_sitenote_note":"","_exactmetrics_sitenote_category":0,"_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"footnotes":""},"categories":[3,12],"tags":[19,18,78,80,81,79,37,32,33,30],"class_list":["post-1862","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-news","category-student","tag-comit","tag-datacollection","tag-ecologicalmodeling","tag-habitat","tag-lidar","tag-marineecosystem","tag-multibeam","tag-noaa","tag-research","tag-usv"],"aioseo_notices":[],"_links":{"self":[{"href":"https:\/\/www.marine.usf.edu\/comit\/wp-json\/wp\/v2\/posts\/1862","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.marine.usf.edu\/comit\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.marine.usf.edu\/comit\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.marine.usf.edu\/comit\/wp-json\/wp\/v2\/users\/29"}],"replies":[{"embeddable":true,"href":"https:\/\/www.marine.usf.edu\/comit\/wp-json\/wp\/v2\/comments?post=1862"}],"version-history":[{"count":12,"href":"https:\/\/www.marine.usf.edu\/comit\/wp-json\/wp\/v2\/posts\/1862\/revisions"}],"predecessor-version":[{"id":2663,"href":"https:\/\/www.marine.usf.edu\/comit\/wp-json\/wp\/v2\/posts\/1862\/revisions\/2663"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/www.marine.usf.edu\/comit\/wp-json\/wp\/v2\/media\/1872"}],"wp:attachment":[{"href":"https:\/\/www.marine.usf.edu\/comit\/wp-json\/wp\/v2\/media?parent=1862"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.marine.usf.edu\/comit\/wp-json\/wp\/v2\/categories?post=1862"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.marine.usf.edu\/comit\/wp-json\/wp\/v2\/tags?post=1862"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}